The machine shop didn't get the valve seats all the way down when they pressed them in and now they are slowly moving inward , as the seat moves further into the head the valve stem moves upward which decreased your clearance....I'd check them frequently to make sure that you don't burn a valve. After enough time goes by the seats should be all the way in, but i don't like the idea of driving around until they seat, your valve grind may also change depending on whether the seat was pressed squarely into the head or if its going to change when it reaches the bottom.